PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G087200.1
Common NamePHAVU_008G087200g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 152aa    MW: 16661.9 Da    PI: 4.5353
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G087200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.000247431954
                        HHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS
                 HLH 19 afeeLrellPkas.kapskKlsKaeiLekAveYIksL 54
                        +++ L + l ++   ++s+ l+Ka+i   A +YI +L
  Phvul.008G087200.1  7 RIASLEQTLQQLRdVTNSTALNKASIIVDASKYIEEL 43
                        56666666666443678888**************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-5658IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-51454IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516719.34682151IPR002912ACT domain
CDDcd048734.73E-488147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MAFRDKRIAS LEQTLQQLRD VTNSTALNKA SIIVDASKYI EELKQKVEGL NSELGITESS  60
SNSQIDELPT VTVKTLKKGF LINVLLEKNS PGMLVSILEA FEELGLDVLD ARVSCEDSFQ  120
LEAVGRESHK NDSVDAQVVK QAVLRAIKNE D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0923090.0BT092309.1 Soybean clone JCVI-FLGm-10J13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140138.11e-105hypothetical protein PHAVU_008G087200g
TrEMBLV7B2L61e-105V7B2L6_PHAVU; Uncharacterized protein
STRINGGLYMA09G41470.12e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF7241015
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.18e-11bHLH family protein